Issue 2 move folders and use deep path include file names to prevent collisions (#4)

* moving folders and files and adjust server demo build

* Fix Makefile for apps/server on Linux

* fix unit test source file folders

* fix datetime convert UTC functions. Add Code::Blocks project for datetime testing

* added some ignore extensions

* disable parallel make option

* fix build for abort, dcc, and epics apps

* fix build for dcc, epics, error, and getevent apps.

* Fixed building of all apps

* fix the ipv4 to ipv6 router app build

* Change indent style from Google to Webkit

* make pretty to re-format style

* removed common Makefile since we already had one and two was too many

* remove scripts from root folder that are no longer maintained or used

* remove mercurial EOL and ignore files for git repo

* remove .vscodeconfig files from repo

* tweak clang-format style

* clang-format src and apps with tweaked style

* added clang-tidy to fix readability if braces in src

* result of make tidy for src and apps

* fix clang-tidy mangling

* Added code::blocks project for BACnet server simulation

* added code::blocks linux project for WhoIs app

* update text files for EOL

* fix EOL in some files

* fixed make win32 apps for older gcc

* Removed Borland C++ Makefile in apps. Unable to maintain support for Borland C++ compiler.

* created codeblocks project for apps/epics for Windows

* fixing ports/xplained to work with new data structure.

* fix ports/xplained example for Atmel Studio compile

* fix ports/stm32f10x example for gcc Makefile compile

* fix ports/stm32f10x example for IAR EWARM compile

* fix ports/xplained timer callback

* fix ports/bdk_atxx_mspt build with subdirs

* fix ports/bdk_atxx_mspt build with subdirs

* updated git ignore for IAR build artifacts

* updated gitignore for non-tracked files and folders

* fixed bdk-atxx4-mstp port for Rowley Crossworks project file

* fixed bdk-atxx4-mstp port for GCC AVR Makefile

* fixed atmega168 port for IAR AVR and GCC AVR Makefile

* fixed at91sam7s port for IAR ARM and GCC ARM Makefile

* removed unmaintainable DOS, RTOS32, and atmega8 ports.  Updated rx62n (untested).

* changed arm7 to uip port

ports/bdk-atxx4-mstp/test.c

@@ -26,12 +26,12 @@
 #include <stdbool.h>
 #include <string.h>
 #include "hardware.h"
-#include "timer.h"
+#include "bacnet/basic/sys/mstimer.h"
 #include "serial.h"
 #include "input.h"
-#include "bo.h"
+#include "bacnet/basic/object/bo.h"
 #include "rs485.h"
-#include "dlmstp.h"
+#include "bacnet/datalink/dlmstp.h"
 #include "seeprom.h"
 #include "nvdata.h"
 /* me */
@@ -47,7 +47,7 @@ const char * const binary_string[BINARY_STRING_MAX] = {
 };
 
 /* timer for test task */
-static struct itimer Test_Timer;
+static struct mstimer Test_Timer;
 /* MAC Address of MS/TP */
 static uint8_t MSTP_MAC_Address;
 
@@ -59,7 +59,7 @@ void test_init(
 #else
     serial_baud_rate_set(9600);
 #endif
-    timer_interval_start_seconds(&Test_Timer, 1);
+    mstimer_set(&Test_Timer, 1*1000);
     /* configure a port pin as output */
 #if (BDK_VERSION==4)
     BIT_SET(DDRD, DDB5);
@@ -147,8 +147,8 @@ static inline void test_pin_toggle(
 void test_task(
     void)
 {
-    if (timer_interval_expired(&Test_Timer)) {
-        timer_interval_reset(&Test_Timer);
+    if (mstimer_expired(&Test_Timer)) {
+        mstimer_reset(&Test_Timer);
         MSTP_MAC_Address = MSTP_MAC_Address;
     }
 }
@@ -161,8 +161,8 @@ void test_task(
     uint8_t data_register = 0;
     uint16_t id = 0;
 
-    if (timer_interval_expired(&Test_Timer)) {
-        timer_interval_reset(&Test_Timer);
+    if (mstimer_expired(&Test_Timer)) {
+        mstimer_reset(&Test_Timer);
         sprintf(Send_Buffer, "BACnet: 0000000\r\n");
         MSTP_MAC_Address = input_address();
         Send_Buffer[8] = (MSTP_MAC_Address & BIT0) ? '1' : '0';